On Tuesday december 6th 2022 at 01.45 PM, Roderick Bouman will defend his thesis Systematics, biogeography and bioactivity of the genus Phyllanthus L. and related genera of tribe Phyllantheae (Phyllanthaceae). With this, he finishes his PhD research at the Hortus botanicus in Leiden and Naturalis Biodiversity Center, which he started in 2015.
Shrubs, herbs and trees
‘They never bloom when I give a tour to anyone,’ Roderick says, pointing out two shrubs in the tropical greenhouse of the Hortus botanicus, ‘and the flowers are especially beautiful.’ While walking through the different greenhouses, Roderick points to trees, shrubs, herbs and even water plants, all of which are part of the topic of his PhD research: the plant genus Phyllanthus. This shows how diverse and complex this plant genus is. In addition, in the 19th century about ten groups were combined under the genus Phyllanthus, causing this genus to encompass over 800 plant species.
Phyllanthus comprises a diverse group of plants that occurs in tropical and subtropical regions. ‘Most of them are shrubs, with extremely small flowers. They are gorgeous, underneath a macro lens, because most of them are just 3 millimeters wide.’ The structure of the flowers eventually became the reason that a researcher decided to unite different groups under one genus around 1860.
DNA researchand classification
‘A rough study in 2006 had created a phylogenetic tree of a little under 10% of the group using DNA research. This showed that Phyllanthus was mixed with several other groups, including the genus Breynia.’ So, Phyllanthus was a little more complicated than initially expected, and something had to happen regarding the classification. Eventually, this research led to the aim of Roderick’s PhD: clarify this pedigree. ‘It was up to me to continue this work and expand the dataset.’
During his PhD, Roderick went looking for a classification that fitted both the morphology and genetics of the plants. This meant a lot of time in the lab for DNA research to expand the pedigree. He used fresh materials from different botanical gardens for this as well as dried herbarium collections from Naturalis. ‘Herbarium collections such as those from Naturalis are very valuable because you can extract DNA from them, even though this is much harder than getting DNA from live material. That is why I also requested a lot of material from the network of botanical gardens.’
Part of the material that he used for his PhD research, he collected himself while out on field work. Unfortunately, things don’t always work out as planned. For example, when he went to China for two months for field work, looking for a specific subgroup of Phyllanthus. ‘We didn’t find it. The collections and location information are usually very old and often only point out a province. Those are larger than the Netherlands, this is still a very large area to search,’ he laughs.
Despite the fact that not all paths lead to desired outcome, there still was plenty of material to publish and write his thesis. His promotion “booklet” looks more like an encyclopedia than a dissertation in terms of thickness. ‘It is a weird feeling that is done now, this booklet is almost a quarter of my life,’ Roderick reminisces.
Through DNA research on about 250 of the more than 800 species that belonged to the genus Phyllanthus according to the original classification, Roderick has finally been able to clarify the pedigree. Nine genera were separated from the renewed genus Phyllanthus, leading it to comprise approximately 200 species. ‘Many genera that were combined with Phyllanthus in the 19th century, have been brought back.’ But the work on the genus continues. Both Roderick and a new PhD candidate at Naturalis continue to work on Phyllanthus and the new groups.
Since November last year, Roderick has been working as a collection manager at the Hortus botanicus where he will continue his research. For subsequent studies he hopes to maintain his connections with Naturalis. You can follow his promotion via this link.